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Component Manager changes folder/file ownership to Root

Component Manager changes folder/file ownership to Root

Every time I run Component Manager for and Install / Upgrade or Remove (tried all 3) it has issues either during or after.

 

On looking through SSH - the Component Manager is (during or on completion) changing the ownership of the folders to "ROOT" for user and group!

 

How can I fix this?

What can be causing this?

 

It doesn't allow an install because it happens at a crucial time and then freezes the site after a uninstall and won't load the "uninstall-success" page due to rights.

 

Any thoughts what could be causing the change of ownership?